import torchModel Salience Estimation
Model salience has been used extensively in the XAI community to help interpret why models make their decisions. One of the most popular salience methods is Gradient-Weighted Class Activation Mappings (Grad-CAMs), which visulaizes the gradients of the predicted class at the final convolutional layer.
IMAGE_PATH: str = "../data/images/ffhq_aligned/00001.png"
MODEL_PATH: str = "../models/weights/Densenet/densenet_cyborg_1/Logs/final_model.pth"
NETWORK: str = "densenet"
GRADCAM_TYPE: str = "gradcam"
SIZE: str = "upscaled"
OUTPUT_PATH: str = "../output/cams/00001.png"Necessary Arguments
device = torch.device('cpu')Loading the Model
import torchvision.models as models
import torch.nn as nnFirst, load in the weights
weights = torch.load(MODEL_PATH, map_location=device)Now, load weights on a single binary DesNet121 model
if NETWORK == "resnet":
im_size = 224
model = models.resnet50(pretrained=True)
num_ftrs = model.fc.in_features
model.fc = nn.Linear(num_ftrs, 2)
elif NETWORK == "inception":
im_size = 299
model = models.inception_v3(pretrained=True,aux_logits=False)
num_ftrs = model.fc.in_features
model.fc = nn.Linear(num_ftrs, 2)
elif NETWORK == "xception":
im_size = 299
model, *_ = model_selection(modelname='xception', num_out_classes=2)
else: # else DenseNet
im_size = 224
model = models.densenet121(pretrained=True)
num_ftrs = model.classifier.in_features
model.classifier = nn.Linear(num_ftrs, 2)/afs/crc.nd.edu/group/TAI/Users/painswor/Explain2Me-Framework-Example/.venv/lib/python3.9/site-packages/torchvision/models/_utils.py:208: UserWarning: The parameter 'pretrained' is deprecated since 0.13 and may be removed in the future, please use 'weights' instead.
warnings.warn(
/afs/crc.nd.edu/group/TAI/Users/painswor/Explain2Me-Framework-Example/.venv/lib/python3.9/site-packages/torchvision/models/_utils.py:223: UserWarning: Arguments other than a weight enum or `None` for 'weights' are deprecated since 0.13 and may be removed in the future. The current behavior is equivalent to passing `weights=DenseNet121_Weights.IMAGENET1K_V1`. You can also use `weights=DenseNet121_Weights.DEFAULT` to get the most up-to-date weights.
warnings.warn(msg)
target_layers = [model.features[-1]]
model.load_state_dict(weights['state_dict'])
model = model.to(device)
model.eval()DenseNet(
(features): Sequential(
(conv0): Conv2d(3, 64, kernel_size=(7, 7), stride=(2, 2), padding=(3, 3), bias=False)
(norm0): BatchNorm2d(64, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu0): ReLU(inplace=True)
(pool0): MaxPool2d(kernel_size=3, stride=2, padding=1, dilation=1, ceil_mode=False)
(denseblock1): _DenseBlock(
(denselayer1): _DenseLayer(
(norm1): BatchNorm2d(64, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(64, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer2): _DenseLayer(
(norm1): BatchNorm2d(96, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(96, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer3): _DenseLayer(
(norm1): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(128, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer4): _DenseLayer(
(norm1): BatchNorm2d(160, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(160, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer5): _DenseLayer(
(norm1): BatchNorm2d(192, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(192, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer6): _DenseLayer(
(norm1): BatchNorm2d(224, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(224, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
)
(transition1): _Transition(
(norm): BatchNorm2d(256, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu): ReLU(inplace=True)
(conv): Conv2d(256, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(pool): AvgPool2d(kernel_size=2, stride=2, padding=0)
)
(denseblock2): _DenseBlock(
(denselayer1): _DenseLayer(
(norm1): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(128, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer2): _DenseLayer(
(norm1): BatchNorm2d(160, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(160, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer3): _DenseLayer(
(norm1): BatchNorm2d(192, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(192, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer4): _DenseLayer(
(norm1): BatchNorm2d(224, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(224, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer5): _DenseLayer(
(norm1): BatchNorm2d(256, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(256, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer6): _DenseLayer(
(norm1): BatchNorm2d(288, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(288, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer7): _DenseLayer(
(norm1): BatchNorm2d(320, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(320, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer8): _DenseLayer(
(norm1): BatchNorm2d(352, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(352, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer9): _DenseLayer(
(norm1): BatchNorm2d(384, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(384, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer10): _DenseLayer(
(norm1): BatchNorm2d(416, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(416, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer11): _DenseLayer(
(norm1): BatchNorm2d(448, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(448, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer12): _DenseLayer(
(norm1): BatchNorm2d(480, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(480, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
)
(transition2): _Transition(
(norm): BatchNorm2d(512, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu): ReLU(inplace=True)
(conv): Conv2d(512, 256, kernel_size=(1, 1), stride=(1, 1), bias=False)
(pool): AvgPool2d(kernel_size=2, stride=2, padding=0)
)
(denseblock3): _DenseBlock(
(denselayer1): _DenseLayer(
(norm1): BatchNorm2d(256, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(256, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer2): _DenseLayer(
(norm1): BatchNorm2d(288, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(288, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer3): _DenseLayer(
(norm1): BatchNorm2d(320, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(320, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer4): _DenseLayer(
(norm1): BatchNorm2d(352, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(352, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer5): _DenseLayer(
(norm1): BatchNorm2d(384, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(384, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer6): _DenseLayer(
(norm1): BatchNorm2d(416, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(416, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer7): _DenseLayer(
(norm1): BatchNorm2d(448, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(448, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer8): _DenseLayer(
(norm1): BatchNorm2d(480, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(480, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer9): _DenseLayer(
(norm1): BatchNorm2d(512, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(512, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer10): _DenseLayer(
(norm1): BatchNorm2d(544, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(544, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer11): _DenseLayer(
(norm1): BatchNorm2d(576, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(576, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer12): _DenseLayer(
(norm1): BatchNorm2d(608, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(608, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer13): _DenseLayer(
(norm1): BatchNorm2d(640, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(640, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer14): _DenseLayer(
(norm1): BatchNorm2d(672, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(672, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer15): _DenseLayer(
(norm1): BatchNorm2d(704, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(704, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer16): _DenseLayer(
(norm1): BatchNorm2d(736, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(736, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer17): _DenseLayer(
(norm1): BatchNorm2d(768, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(768, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer18): _DenseLayer(
(norm1): BatchNorm2d(800, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(800, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer19): _DenseLayer(
(norm1): BatchNorm2d(832, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(832, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer20): _DenseLayer(
(norm1): BatchNorm2d(864, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(864, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer21): _DenseLayer(
(norm1): BatchNorm2d(896, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(896, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer22): _DenseLayer(
(norm1): BatchNorm2d(928, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(928, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer23): _DenseLayer(
(norm1): BatchNorm2d(960, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(960, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer24): _DenseLayer(
(norm1): BatchNorm2d(992, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(992, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
)
(transition3): _Transition(
(norm): BatchNorm2d(1024, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu): ReLU(inplace=True)
(conv): Conv2d(1024, 512, kernel_size=(1, 1), stride=(1, 1), bias=False)
(pool): AvgPool2d(kernel_size=2, stride=2, padding=0)
)
(denseblock4): _DenseBlock(
(denselayer1): _DenseLayer(
(norm1): BatchNorm2d(512, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(512, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer2): _DenseLayer(
(norm1): BatchNorm2d(544, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(544, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer3): _DenseLayer(
(norm1): BatchNorm2d(576, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(576, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer4): _DenseLayer(
(norm1): BatchNorm2d(608, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(608, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer5): _DenseLayer(
(norm1): BatchNorm2d(640, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(640, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer6): _DenseLayer(
(norm1): BatchNorm2d(672, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(672, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer7): _DenseLayer(
(norm1): BatchNorm2d(704, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(704, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer8): _DenseLayer(
(norm1): BatchNorm2d(736, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(736, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer9): _DenseLayer(
(norm1): BatchNorm2d(768, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(768, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer10): _DenseLayer(
(norm1): BatchNorm2d(800, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(800, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer11): _DenseLayer(
(norm1): BatchNorm2d(832, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(832, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer12): _DenseLayer(
(norm1): BatchNorm2d(864, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(864, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer13): _DenseLayer(
(norm1): BatchNorm2d(896, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(896, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer14): _DenseLayer(
(norm1): BatchNorm2d(928, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(928, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer15): _DenseLayer(
(norm1): BatchNorm2d(960, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(960, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
(denselayer16): _DenseLayer(
(norm1): BatchNorm2d(992, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu1): ReLU(inplace=True)
(conv1): Conv2d(992, 128, kernel_size=(1, 1), stride=(1, 1), bias=False)
(norm2): BatchNorm2d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
(relu2): ReLU(inplace=True)
(conv2): Conv2d(128, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1), bias=False)
)
)
(norm5): BatchNorm2d(1024, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
)
(classifier): Linear(in_features=1024, out_features=2, bias=True)
)
Preprocessing
import torchvision.transforms as transformsif NETWORK == "xception":
# Transformation specified for the pre-processing
transform = transforms.Compose([
transforms.Resize([im_size, im_size]),
transforms.ToTensor(),
transforms.Normalize([0.5]*3, [0.5]*3)
])
else:
# Transformation specified for the pre-processing
transform = transforms.Compose([
transforms.Resize([im_size, im_size]),
transforms.ToTensor(),
transforms.Normalize(mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225])
])imageScores = []
sigmoid = nn.Sigmoid()Creating GradCam
from PIL import Image
from torchcam.methods import GradCAM
from torchcam.methods import GradCAMpp
import skimage.ioLoad the image
# Loading in the image
image = Image.open(IMAGE_PATH).convert('RGB')
# Image transformation
input_tensor = transform(image)Generate GradCAM
if GRADCAM_TYPE == "gradcam":
#cam_extractor = GradCAM(model, target_layers)
cam_extractor = GradCAM(model)
elif GRADCAM_TYPE == "gradcamPP":
cam_extractor = GradCAMpp(model, target_layers)WARNING:root:no value was provided for `target_layer`, thus set to 'features'.
Processing GradCAM
from torchvision.transforms.functional import normalize, resize, to_pil_image
from torchcam.utils import overlay_maskPreprocess your data and feed it to the model
out = model(input_tensor.unsqueeze(0))Retrieve the CAM by passing class index and model output
activation_map = cam_extractor(out.squeeze(0).argmax().item(), out)cam = to_pil_image(activation_map[0].squeeze(0), mode='F')
cam = overlay_mask(image, cam, alpha=0.50)
if SIZE == 'upscaled':
cam = cam.resize((im_size, im_size), resample = Image.BICUBIC)Display GradCAM
import matplotlib.pyplot as plt
from mpl_toolkits.axes_grid1 import ImageGridoriginal_image = Image.open(IMAGE_PATH).convert('RGB')
overlayed_cam = cam
fig = plt.figure(figsize=(10., 8.), facecolor='white')
grid = ImageGrid(fig, 111, # similar to subplot(111)
nrows_ncols=(1, 2), # creates 2x2 grid of axes
axes_pad=0.1, # pad between axes in inch.
aspect=1.2
)
for index, (ax, im) in enumerate(zip(grid, [original_image, overlayed_cam])):
# Iterating over the grid returns the Axes.
ax.axis('off')
ax.grid(None)
ax.imshow(im)
#ax.set_title(predictions[index], fontsize=45)
fig.set_size_inches(32, 18)
plt.show()
cam.save(OUTPUT_PATH)